Feel free to use these slides and their content for any purpose under the cc-by license.
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Caveats regarding course and slide content:
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This is the first round of this course, I am preparing slides on a week-to-week "survival mode". The class material and slides are not polished and will be improved next (and the following) years...
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Topic selection is biased toward my personal interests (and research)).
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Some slides are reflecting my personal views that might be controversial/provocative. Happy to debate :-)
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I am reaching out to researchers for slides and integrate them into my presentations. This means that some of the topics are heavily biased toward the work from specific labs. I plan to improve this aspect in future rounds of the course. Please reach out if you have a topic / specific research paper/s to suggest for the course.
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Course slides:
Lecture 1: course overview
Lecture 2: single cell phenotypic profiling
Lecture 3: cell biology & microscopy. Guest lecture by Natalie Elia
Lecture 4: phenotypic screening
Lecture 5: deep learning in microscopy
Lecture 6: deep learning in microscopy
Lecture 7: deep learning in microscopy + guest lecture by Tammy Riklin-Raviv
Lecture 8: guest lecture by Kota Miura on bioimage analysis + student lectures
Lecture 9: guest lecture by Yaron Gurovich on medical imaging + student lectures
Lecture 10: guest lecture by Tal Shay on systems biology + student lectures