Sharing and Reusing Cell Image Data

Program:

1:30-1:40 pm Introduction, Assaf Zaritsky (@AssafZaritsky), UT Southwestern Medical Center and The Weizmann Institute, slides 

1:40-2:00 pm Research parasites? Research symbionts? But I just want to do my research! Casey Greene, (@GreeneScientist), University of Pennsylvania, slides

2:00-2:20 pm An open data exchange ecosystem for cell migration data. Lennart Martens (@compomics), Ghent University, slides

2:20-2:40 pm Using (and reusing) experimental data in computational models. Paul Macklin (@MathCancer), Indiana University, slides

2:40-3:00 pm The Image Data Resource: a platform for publishing, integrating and mining biological imaging data at scale. Jason Swedlow (@jrswedlow), University of Dundee, slides

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3:00-3:30 pm Coffee break

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3:30-4:10 pm Editor panel on sharing and reusing cell imaging data. Laurie Goodman (@Grimhawk1), GigaScience; Emma Ganley (@GanleyEmma), PLoS Biology; QuinceyJustman (@QuinceyJustman), Cell Systems; Thomas Lemberger (@tlemberger), Molecular Systems Biology; Marie Bao, Developmental Cell. Moderator: Lennart Martens

4:10-4:30 pm The Allen Institute for Cell Science: Building tools and sharing data to empower the scientific community. Winfried Wiegrabe, Allen Institute of Cell Science, slides 

4:30-4:50 pm Integrating Information from Diverse Microscope Images: Learning and Using Generative Models of Cell Organization. Robert F. Murphy (@murphy2537), Carnegie Mellon University

4:50-5:10 pm Quantitative functional imaging of cell adhesion and migration. Benny Geiger, The Weizmann Institute of Science

5:10-5:30 pm Discussion: Barriers and solution for image data share and reuse in cell biology. Moderator: Assaf Zaritsky, slides

 

The introduction, Casey Greene's and Lennart Martens' talks were recorded, the raw (to be edited) version can be found here.